Triple
T19992670
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | APOE ε3 allele |
E494101
|
entity |
| Predicate | involvedInBiologicalProcess |
P35137
|
FINISHED |
| Object | lipoprotein particle remodeling |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: lipoprotein particle remodeling | Statement: [APOE ε3 allele, involvedInBiologicalProcess, lipoprotein particle remodeling]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: involvedInBiologicalProcess Context triple: [APOE ε3 allele, involvedInBiologicalProcess, lipoprotein particle remodeling]
-
A.
affectsBiologicalProcess
Indicates a relationship where one entity produces a change or influence on a biological process of another entity or system.
-
B.
biologicalRole
Indicates the functional role or purpose that one biological entity has in relation to another or within a biological process.
-
C.
biologicalEvent
chosen
Indicates a relationship where an entity participates in, causes, or is affected by a process or occurrence in a biological system.
-
D.
regulatoryPathway
Indicates that one entity is part of, or participates in, a biological or organizational regulatory pathway that controls the activity, expression, or behavior of another.
-
E.
usedInBiology
Indicates that something is employed, applied, or serves a function within the field or practices of biology.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69da626a67648190af9653832a3aeced |
completed | April 11, 2026, 3:02 p.m. |
| NER | Named-entity recognition | batch_69e65fe10ffc81908c94168b0a8ea9c9 |
completed | April 20, 2026, 5:18 p.m. |
| PD | Predicate disambiguation | batch_69e537fd311881908448f2aea8b4812e |
completed | April 19, 2026, 8:15 p.m. |
Created at: April 11, 2026, 3:31 p.m.