Triple
T19772999
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Prevnar 13 |
E474933
|
entity |
| Predicate | isConjugatedTo |
P137279
|
FINISHED |
| Object | CRM197 diphtheria protein |
—
|
NE NERFINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: CRM197 diphtheria protein | Statement: [Prevnar 13, isConjugatedTo, CRM197 diphtheria protein]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: CRM197 diphtheria protein Context triple: [Prevnar 13, isConjugatedTo, CRM197 diphtheria protein]
-
A.
Corynebacterium diphtheriae
Corynebacterium diphtheriae is a Gram-positive, toxin-producing bacterium that causes the infectious disease diphtheria in humans.
-
B.
diphtheria antitoxin
Diphtheria antitoxin is a serum-based immune therapy that neutralizes the toxin produced by Corynebacterium diphtheriae, used to treat and prevent the severe complications of diphtheria infection.
-
C.
diphtheria
Diphtheria is a serious, potentially life-threatening infectious disease caused by Corynebacterium diphtheriae, characterized by sore throat, fever, and a thick gray membrane in the throat that can obstruct breathing.
-
D.
Streptomyces phage phiC31
Streptomyces phage phiC31 is a bacteriophage whose site-specific integrase has become a widely used tool for stable genome engineering in bacteria, plants, and animals.
-
E.
Serpins
Serpins is a civil parish in the municipality of Lousã in central Portugal, known for its natural landscapes and proximity to the Serra da Lousã.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: CRM197 diphtheria protein Target entity description: CRM197 diphtheria protein is a non-toxic mutant form of diphtheria toxin widely used as a carrier protein in conjugate vaccines to enhance immune responses to attached polysaccharide antigens.
-
A.
Corynebacterium diphtheriae
Corynebacterium diphtheriae is a Gram-positive, toxin-producing bacterium that causes the infectious disease diphtheria in humans.
-
B.
diphtheria antitoxin
Diphtheria antitoxin is a serum-based immune therapy that neutralizes the toxin produced by Corynebacterium diphtheriae, used to treat and prevent the severe complications of diphtheria infection.
-
C.
diphtheria
Diphtheria is a serious, potentially life-threatening infectious disease caused by Corynebacterium diphtheriae, characterized by sore throat, fever, and a thick gray membrane in the throat that can obstruct breathing.
-
D.
Streptomyces phage phiC31
Streptomyces phage phiC31 is a bacteriophage whose site-specific integrase has become a widely used tool for stable genome engineering in bacteria, plants, and animals.
-
E.
Serpins
Serpins is a civil parish in the municipality of Lousã in central Portugal, known for its natural landscapes and proximity to the Serra da Lousã.
- F. None of above. chosen
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: isConjugatedTo Context triple: [Prevnar 13, isConjugatedTo, CRM197 diphtheria protein]
-
A.
conjugate
Indicates that one entity is a grammatical or mathematical counterpart of another, linked by a specific transformation such as verb inflection or complex-number pairing.
-
B.
conjugateTo
Indicates that one entity can be transformed into the other by a specific equivalence operation (such as similarity or group conjugation), so they are equivalent up to that transformation.
-
C.
hasConjunctForms
Indicates that an entity is associated with one or more conjunct (combined or compound) forms of itself or related elements.
-
D.
isContractionOf
Indicates that one term is a shortened or combined form derived from another, more complete expression.
-
E.
hasConjugationOperation
Indicates that there exists an operation that transforms an entity into its conjugate form (e.g., algebraic, complex, or grammatical conjugation).
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d8e51a43a08190956bc6df13c91a77 |
completed | April 10, 2026, 11:55 a.m. |
| NER | Named-entity recognition | batch_69e6535e450c8190a2628245ae0d0bd3 |
completed | April 20, 2026, 4:25 p.m. |
| PD | Predicate disambiguation | batch_69e53053ed2881908400becdfada7fd3 |
completed | April 19, 2026, 7:43 p.m. |
| PDg | Predicate description generation | batch_69e532bbedf081908d801600e2af94a7 |
completed | April 19, 2026, 7:53 p.m. |
Created at: April 10, 2026, 1:48 p.m.