Triple
T17521697
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Bioconductor |
E426691
|
entity |
| Predicate | hasComponent |
P35
|
FINISHED |
| Object | Bioconductor mailing lists |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Bioconductor mailing lists | Statement: [Bioconductor, hasComponent, Bioconductor mailing lists]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Bioconductor mailing lists Context triple: [Bioconductor, hasComponent, Bioconductor mailing lists]
-
A.
Bioconductor
chosen
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
-
B.
CRAN
CRAN is the Comprehensive R Archive Network, a primary repository for R packages, source code, and documentation used by the R programming community.
-
C.
OncoAnalytics
OncoAnalytics is a data and analytics platform by Flatiron Health that provides real-world oncology insights to support cancer research and clinical decision-making.
-
D.
bioRxiv
bioRxiv is an online preprint repository for the biological sciences that allows researchers to share manuscripts publicly before formal peer review and journal publication.
-
E.
Centre for Collaboration with Biobank Networks
The Centre for Collaboration with Biobank Networks is a unit within Norway’s public health system that coordinates and supports cooperation among biobanks to advance research and public health initiatives.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d889de677081909b22d2657b1f0292 |
completed | April 10, 2026, 5:25 a.m. |
| NER | Named-entity recognition | batch_69e452d2f79881909556894728e255ab |
completed | April 19, 2026, 3:58 a.m. |
Created at: April 10, 2026, 5:49 a.m.