Triple
T16318595
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Escherichia coli OP50 |
E396233
|
entity |
| Predicate | organismFed |
P105996
|
FINISHED |
| Object | Caenorhabditis elegans |
E92409
|
NE FINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Caenorhabditis elegans | Statement: [Escherichia coli OP50, organismFed, Caenorhabditis elegans]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Caenorhabditis elegans Context triple: [Escherichia coli OP50, organismFed, Caenorhabditis elegans]
-
A.
Caenorhabditis elegans
chosen
Caenorhabditis elegans is a small, transparent roundworm widely used as a model organism in biology and genetics due to its simple anatomy, fully mapped cell lineage, and well-characterized nervous system.
-
B.
Caenorhabditis
Caenorhabditis is a genus of small, free-living nematode worms widely used as model organisms in biological and genetic research.
-
C.
Caenorhabditis briggsae
Caenorhabditis briggsae is a free-living nematode widely used as a model organism in genetics and developmental biology, closely related to the better-known Caenorhabditis elegans.
-
D.
Caenorhabditis tropicalis
Caenorhabditis tropicalis is a species of free-living nematode used as a model organism in genetics and developmental biology, closely related to the well-studied Caenorhabditis elegans.
-
E.
Caenorhabditis brenneri
Caenorhabditis brenneri is a free-living nematode species closely related to the model organism C. elegans and used in studies of evolution, genetics, and development.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: organismFed Context triple: [Escherichia coli OP50, organismFed, Caenorhabditis elegans]
-
A.
hasOrganism
Indicates that one entity is an organism associated with, contained in, or otherwise possessed by another entity.
-
B.
isFedBy
Indicates that one entity receives nourishment, food, or sustenance from another entity.
-
C.
targetOrganism
Indicates that an action, process, or effect is directed toward or intended to impact a particular organism.
-
D.
isMajorFoodSourceFor
chosen
Indicates that something serves as a primary or significant source of food for another entity.
-
E.
carnivorousOrgan
Indicates that an organ has a structure or function specialized for a carnivorous (animal-eating) mode of feeding.
- F. None of above.
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d87f255b788190a400eba031dd85d8 |
completed | April 10, 2026, 4:40 a.m. |
| NER | Named-entity recognition | batch_69e296b3e3e081908a996b3e57ca4e32 |
completed | April 17, 2026, 8:23 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a00d447f5cc81908757869f2d1e94a1 |
completed | May 10, 2026, 6:54 p.m. |
| PD | Predicate disambiguation | batch_69e219fc72c881909d452274e7af8238 |
completed | April 17, 2026, 11:31 a.m. |
Created at: April 10, 2026, 5:06 a.m.