Triple
T16318573
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Escherichia coli OP50 |
E396233
|
entity |
| Predicate | parentTaxon |
P2891
|
FINISHED |
| Object | Escherichia coli |
E628999
|
NE FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Escherichia coli | Statement: [Escherichia coli OP50, parentTaxon, Escherichia coli]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Escherichia coli Context triple: [Escherichia coli OP50, parentTaxon, Escherichia coli]
-
A.
Escherichia coli
chosen
Escherichia coli is a widely studied, rod-shaped bacterium commonly found in the intestines of warm-blooded animals and extensively used as a model organism in microbiology and genetics.
-
B.
Escherichia
Escherichia is a genus of rod-shaped, facultatively anaerobic bacteria best known for the species Escherichia coli, a common inhabitant of the human gut and an important model organism in microbiology.
-
C.
Enterobacter
Enterobacter is a genus of Gram-negative, rod-shaped bacteria commonly found in soil, water, and the intestinal tracts of animals, some species of which are opportunistic human pathogens.
-
D.
Serratia
Serratia is a genus of Gram-negative, rod-shaped bacteria best known for species like Serratia marcescens, which can be opportunistic human pathogens and often produce a characteristic red pigment.
-
E.
Klebsiella
Klebsiella is a genus of Gram-negative bacteria that includes important opportunistic human pathogens commonly associated with hospital-acquired infections such as pneumonia, urinary tract infections, and sepsis.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d87f255b788190a400eba031dd85d8 |
completed | April 10, 2026, 4:40 a.m. |
| NER | Named-entity recognition | batch_69e296b3e3e081908a996b3e57ca4e32 |
completed | April 17, 2026, 8:23 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a002606f0e0819081f50dae9e6b7a0d |
completed | May 10, 2026, 6:30 a.m. |
Created at: April 10, 2026, 5:06 a.m.