Triple
T15563996
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Pacific Biosciences of California, Inc. |
E371069
|
entity |
| Predicate | knownFor |
P22
|
FINISHED |
| Object |
Single Molecule, Real-Time (SMRT) sequencing
Single Molecule, Real-Time (SMRT) sequencing is a next-generation DNA sequencing technology that directly observes DNA polymerase activity on single DNA molecules to generate long, high-accuracy reads in real time.
|
E75827
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Single Molecule, Real-Time (SMRT) sequencing | Statement: [Pacific Biosciences of California, Inc., knownFor, Single Molecule, Real-Time (SMRT) sequencing]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Single Molecule, Real-Time (SMRT) sequencing Context triple: [Pacific Biosciences of California, Inc., knownFor, Single Molecule, Real-Time (SMRT) sequencing]
-
A.
Sanger sequencing
Sanger sequencing is a DNA sequencing method that uses chain-terminating dideoxynucleotides to determine the precise order of nucleotides in a DNA molecule.
-
B.
Pacific Biosciences
Pacific Biosciences is a biotechnology company specializing in advanced DNA sequencing technologies, particularly long-read sequencing platforms used in genomics research.
-
C.
Ion Torrent
Ion Torrent is a DNA sequencing technology platform known for its semiconductor-based sequencing method that detects hydrogen ions released during nucleotide incorporation.
-
D.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
-
E.
Oxford Nanopore Technologies
Oxford Nanopore Technologies is a biotechnology company that develops and commercializes nanopore-based DNA and RNA sequencing devices for real-time, portable genomic analysis.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Single Molecule, Real-Time (SMRT) sequencing Triple: [Pacific Biosciences of California, Inc., knownFor, Single Molecule, Real-Time (SMRT) sequencing]
Generated description
Single Molecule, Real-Time (SMRT) sequencing is a next-generation DNA sequencing technology that directly observes DNA polymerase activity on single DNA molecules to generate long, high-accuracy reads in real time.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Single Molecule, Real-Time (SMRT) sequencing Target entity description: Single Molecule, Real-Time (SMRT) sequencing is a next-generation DNA sequencing technology that directly observes DNA polymerase activity on single DNA molecules to generate long, high-accuracy reads in real time.
-
A.
Sanger sequencing
Sanger sequencing is a DNA sequencing method that uses chain-terminating dideoxynucleotides to determine the precise order of nucleotides in a DNA molecule.
-
B.
Pacific Biosciences
chosen
Pacific Biosciences is a biotechnology company specializing in advanced DNA sequencing technologies, particularly long-read sequencing platforms used in genomics research.
-
C.
Ion Torrent
Ion Torrent is a DNA sequencing technology platform known for its semiconductor-based sequencing method that detects hydrogen ions released during nucleotide incorporation.
-
D.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
-
E.
Oxford Nanopore Technologies
Oxford Nanopore Technologies is a biotechnology company that develops and commercializes nanopore-based DNA and RNA sequencing devices for real-time, portable genomic analysis.
- F. None of above.
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d85cc6cf40819091f4a5facee1ebe6 |
completed | April 10, 2026, 2:13 a.m. |
| NER | Named-entity recognition | batch_69e04ddc66448190948280fb0c8d390c |
completed | April 16, 2026, 2:47 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69ff456a3b08819092f9f517bbef5577 |
completed | May 9, 2026, 2:32 p.m. |
| NEDg | Description generation | batch_69ff49541fcc8190a1d22721bc255e19 |
completed | May 9, 2026, 2:48 p.m. |
| NED2 | Entity disambiguation (via description) | batch_69ff49f6db508190b0127a59d332512e |
completed | May 9, 2026, 2:51 p.m. |
Created at: April 10, 2026, 4:10 a.m.