Triple

T12544134
Position Surface form Disambiguated ID Type / Status
Subject Yamanaka factors E299917 entity
Predicate hasMember P10 FINISHED
Object Sox2
Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
 E988826 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Sox2 | Statement: [Yamanaka factors, hasMember, Sox2]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: Sox2
Context triple: [Yamanaka factors, hasMember, Sox2]
  • A. Hoxa
    Hoxa is a small settlement on the Orkney island of South Ronaldsay in Scotland, known for its coastal setting and nearby historic sites.
  • B. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • C. CDK6
    CDK6 is a cyclin-dependent kinase that regulates cell cycle progression and is a key target in certain cancer therapies.
  • D. CDK4
    CDK4 is a cyclin-dependent kinase that regulates cell cycle progression and is a key therapeutic target in certain cancers.
  • E. GNAS
    GNAS is the abbreviation for the Georgian National Academy of Sciences, the leading scientific institution in Georgia that coordinates and promotes research across various disciplines.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Sox2
Triple: [Yamanaka factors, hasMember, Sox2]
Generated description
Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07 
Target entity: Sox2
Target entity description: Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
  • A. Hoxa
    Hoxa is a small settlement on the Orkney island of South Ronaldsay in Scotland, known for its coastal setting and nearby historic sites.
  • B. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • C. CDK6
    CDK6 is a cyclin-dependent kinase that regulates cell cycle progression and is a key target in certain cancer therapies.
  • D. CDK4
    CDK4 is a cyclin-dependent kinase that regulates cell cycle progression and is a key therapeutic target in certain cancers.
  • E. GNAS
    GNAS is the abbreviation for the Georgian National Academy of Sciences, the leading scientific institution in Georgia that coordinates and promotes research across various disciplines.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d6ada707008190aaec1238117c9379 completed April 8, 2026, 7:33 p.m.
NER Named-entity recognition batch_69d9547d6df4819080db8415d386ed38 completed April 10, 2026, 7:50 p.m.
NED1 Entity disambiguation (via context triple) batch_69f655801cac8190b1f9a72f8fed0399 completed May 2, 2026, 7:50 p.m.
NEDg Description generation batch_69f6566f40c08190baec227fb660c948 completed May 2, 2026, 7:54 p.m.
NED2 Entity disambiguation (via description) batch_69f657aec8fc8190b3b08ccb95595958 completed May 2, 2026, 7:59 p.m.
Created at: April 8, 2026, 9:57 p.m.