Triple
T11643014
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Bacillales |
E276704
|
entity |
| Predicate | pathogenicMembers |
P99744
|
FINISHED |
| Object | Staphylococcus aureus |
E928068
|
NE FINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Staphylococcus aureus | Statement: [Bacillales, pathogenicMembers, Staphylococcus aureus]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Staphylococcus aureus Context triple: [Bacillales, pathogenicMembers, Staphylococcus aureus]
-
A.
Staphylococcus
chosen
Staphylococcus is a genus of Gram-positive, round-shaped bacteria commonly found on the skin and mucous membranes of humans and animals, including several species that can cause infections.
-
B.
Streptococcus
Streptococcus is a genus of Gram-positive, often chain-forming bacteria that includes many species significant as human pathogens, such as those causing strep throat, pneumonia, and meningitis.
-
C.
Aerococcus
Aerococcus is a genus of Gram-positive, catalase-negative cocci often associated with opportunistic infections in humans and animals, particularly urinary tract and bloodstream infections.
-
D.
Group B Streptococcus
Group B Streptococcus is a type of bacteria commonly found in the gastrointestinal and genital tracts that can cause serious infections in newborns, pregnant women, and adults with weakened immune systems.
-
E.
Propionibacterium
Propionibacterium is a genus of Gram-positive, anaerobic bacteria best known for its role in cheese production and for species associated with human skin and acne.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: pathogenicMembers Context triple: [Bacillales, pathogenicMembers, Staphylococcus aureus]
-
A.
pathogenicMember
chosen
Indicates that an entity is a member of a group or set that is characterized as pathogenic (capable of causing disease).
-
B.
isPathogenOf
Indicates that one entity is a disease-causing agent (pathogen) that infects or causes illness in another entity.
-
C.
pathogenType
Indicates the specific kind or category of pathogen associated with or responsible for an entity or condition.
-
D.
pathogenicityToHumans
Indicates that an entity has the capacity to cause disease or harmful health effects in humans.
-
E.
nonPathogenicMember
Indicates that one entity is a member of a group or species that does not cause disease in the other entity or in a specified host.
- F. None of above.
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d6aafbb3c081908a9cdb4ecb8d981d |
completed | April 8, 2026, 7:22 p.m. |
| NER | Named-entity recognition | batch_69d8a2cb4ca88190a9322f08416d3974 |
completed | April 10, 2026, 7:12 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69ef1381a49c81909d849edbfab7448e |
completed | April 27, 2026, 7:42 a.m. |
| PD | Predicate disambiguation | batch_69d85dd94bdc819091fa2ed33eb31624 |
completed | April 10, 2026, 2:18 a.m. |
Created at: April 8, 2026, 9:39 p.m.