Triple

T11466935
Position Surface form Disambiguated ID Type / Status
Subject Firmicutes E271802 entity
Predicate contains P35 FINISHED
Object Paenibacillus
Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
E940864 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Paenibacillus | Statement: [Firmicutes, contains, Paenibacillus]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Paenibacillus
Context triple: [Firmicutes, contains, Paenibacillus]
  • A. Bacillus
    Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
  • B. Virgibacillus
    Virgibacillus is a genus of Gram-positive, spore-forming, often halophilic bacteria commonly found in saline and alkaline environments.
  • C. Bacillaceae
    Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
  • D. Bacillales
    Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
  • E. Oceanobacillus
    Oceanobacillus is a genus of Gram-positive, rod-shaped, often halophilic bacteria commonly found in marine and saline environments.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Paenibacillus
Triple: [Firmicutes, contains, Paenibacillus]
Generated description
Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: Paenibacillus
Target entity description: Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
  • A. Bacillus
    Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
  • B. Virgibacillus
    Virgibacillus is a genus of Gram-positive, spore-forming, often halophilic bacteria commonly found in saline and alkaline environments.
  • C. Bacillaceae
    Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
  • D. Bacillales
    Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
  • E. Oceanobacillus
    Oceanobacillus is a genus of Gram-positive, rod-shaped, often halophilic bacteria commonly found in marine and saline environments.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d6aae0c8d881908a5a360c0be3242e completed April 8, 2026, 7:22 p.m.
NER Named-entity recognition batch_69d822f5eb988190b309b8e309f6d1a5 completed April 9, 2026, 10:06 p.m.
NED1 Entity disambiguation (via context triple) batch_69ef12c1cd048190b58410542005acbc completed April 27, 2026, 7:39 a.m.
NEDg Description generation batch_69ef511f8f688190b2806d4e8ab16511 completed April 27, 2026, 12:05 p.m.
NED2 Entity disambiguation (via description) batch_69ef537efcc48190afffaa50f28940d8 completed April 27, 2026, 12:15 p.m.
Created at: April 8, 2026, 9:35 p.m.