Triple

T11466902
Position Surface form Disambiguated ID Type / Status
Subject Bacillus E271801 entity
Predicate nonPathogenicMember P99745 FINISHED
Object Bacillus megaterium
Bacillus megaterium is a large, rod-shaped, non-pathogenic soil bacterium widely used as a model organism and in industrial biotechnology for enzyme and protein production.
 E937948 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Bacillus megaterium | Statement: [Bacillus, nonPathogenicMember, Bacillus megaterium]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: Bacillus megaterium
Context triple: [Bacillus, nonPathogenicMember, Bacillus megaterium]
  • A. Bacillus subtilis
    Bacillus subtilis is a rod-shaped, Gram-positive, endospore-forming bacterium widely used as a model organism in microbiology and biotechnology.
  • B. Bacillus
    Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
  • C. Streptomyces
    Streptomyces is a genus of filamentous, soil-dwelling bacteria renowned for producing a wide variety of clinically important antibiotics and other bioactive compounds.
  • D. Brevibacterium linens
    Brevibacterium linens is a species of bacteria known for producing the characteristic orange-red color and strong aroma of washed-rind cheeses.
  • E. Serratia
    Serratia is a genus of Gram-negative, rod-shaped bacteria best known for species like Serratia marcescens, which can be opportunistic human pathogens and often produce a characteristic red pigment.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Bacillus megaterium
Triple: [Bacillus, nonPathogenicMember, Bacillus megaterium]
Generated description
Bacillus megaterium is a large, rod-shaped, non-pathogenic soil bacterium widely used as a model organism and in industrial biotechnology for enzyme and protein production.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07 
Target entity: Bacillus megaterium
Target entity description: Bacillus megaterium is a large, rod-shaped, non-pathogenic soil bacterium widely used as a model organism and in industrial biotechnology for enzyme and protein production.
  • A. Bacillus subtilis
    Bacillus subtilis is a rod-shaped, Gram-positive, endospore-forming bacterium widely used as a model organism in microbiology and biotechnology.
  • B. Bacillus
    Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
  • C. Streptomyces
    Streptomyces is a genus of filamentous, soil-dwelling bacteria renowned for producing a wide variety of clinically important antibiotics and other bioactive compounds.
  • D. Brevibacterium linens
    Brevibacterium linens is a species of bacteria known for producing the characteristic orange-red color and strong aroma of washed-rind cheeses.
  • E. Serratia
    Serratia is a genus of Gram-negative, rod-shaped bacteria best known for species like Serratia marcescens, which can be opportunistic human pathogens and often produce a characteristic red pigment.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d6aae0c8d881908a5a360c0be3242e completed April 8, 2026, 7:22 p.m.
NER Named-entity recognition batch_69d85ddffdf88190a00e94ad5b8b91a5 completed April 10, 2026, 2:18 a.m.
NED1 Entity disambiguation (via context triple) batch_69ee866bb71c819091573965f7cf0dee completed April 26, 2026, 9:40 p.m.
NEDg Description generation batch_69eeb310e04c8190a1004662d5bbc015 completed April 27, 2026, 12:51 a.m.
NED2 Entity disambiguation (via description) batch_69eee95dfff48190a3c3022cdfc6dafc completed April 27, 2026, 4:43 a.m.
Created at: April 8, 2026, 9:35 p.m.