Triple

T11466779
Position Surface form Disambiguated ID Type / Status
Subject Mycobacterium tuberculosis complex E271799 entity
Predicate containsTaxon P9413 FINISHED
Object Mycobacterium caprae E462931 NE FINISHED

How this triple was built (2 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Mycobacterium caprae | Statement: [Mycobacterium tuberculosis complex, containsTaxon, Mycobacterium caprae]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Mycobacterium caprae
Context triple: [Mycobacterium tuberculosis complex, containsTaxon, Mycobacterium caprae]
  • A. Mycobacterium canettii
    Mycobacterium canettii is a rare, smooth-colony–forming member of the Mycobacterium tuberculosis complex that causes tuberculosis-like disease in humans and is considered evolutionarily ancestral to typical M. tuberculosis strains.
  • B. Mycobacterium marinum
    Mycobacterium marinum is a waterborne, slow-growing, non-tuberculous mycobacterial species that commonly infects fish and can cause skin and soft tissue infections in humans, especially after exposure to aquariums or natural bodies of water.
  • C. Mycobacterium chelonae
    Mycobacterium chelonae is a rapidly growing nontuberculous mycobacterial species that can cause skin, soft tissue, and ocular infections in humans, often associated with trauma or medical procedures.
  • D. Mycobacterium bovis chosen
    Mycobacterium bovis is a slow-growing, pathogenic bacterium that primarily causes tuberculosis in cattle and can infect humans, and it serves as the basis for the widely used BCG vaccine.
  • E. Mycobacterium kansasii
    Mycobacterium kansasii is a slow-growing, non-tuberculous mycobacterial species that commonly causes pulmonary infections resembling tuberculosis, particularly in immunocompromised individuals.
  • F. None of above.
  • G. Unsure - the case is ambiguous/there is not enough information to decide.

Provenance (3 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d6aae0c8d881908a5a360c0be3242e completed April 8, 2026, 7:22 p.m.
NER Named-entity recognition batch_69d822f5eb988190b309b8e309f6d1a5 completed April 9, 2026, 10:06 p.m.
NED1 Entity disambiguation (via context triple) batch_69ef12c1cd048190b58410542005acbc completed April 27, 2026, 7:39 a.m.
Created at: April 8, 2026, 9:35 p.m.