Pfam domains
E736821
Pfam domains are conserved protein regions defined in the Pfam database that represent functional and structural units shared across different proteins.
Observed surface forms (1)
| Surface form | Occurrences |
|---|---|
| Pfam domain | 0 |
Statements (49)
| Predicate | Object |
|---|---|
| instanceOf |
conserved protein region
ⓘ
protein domain family ⓘ |
| definedIn | Pfam database NERFINISHED ⓘ |
| hasDatabaseAccessionPrefix | PF ⓘ |
| hasExample |
PF00005 (ABC transporter ATP-binding domain)
ⓘ
PF00069 (protein kinase domain) ⓘ PF00072 (response regulator receiver domain) ⓘ PF00076 (RNA recognition motif) NERFINISHED ⓘ PF00096 (zinc finger C2H2 type) ⓘ |
| hasPrimaryAccessURL | https://pfam.xfam.org ⓘ |
| hasProperty |
associated with GO terms
ⓘ
associated with InterPro entries ⓘ associated with full alignment ⓘ associated with gathering threshold score ⓘ associated with noise cutoff score ⓘ associated with seed alignment ⓘ associated with sequence logos ⓘ associated with trusted cutoff score ⓘ can be found in different combinations in proteins ⓘ can be shared across different species ⓘ can occur in multiple copies within a protein ⓘ conserved across multiple proteins ⓘ curated by experts ⓘ linked to other protein family databases ⓘ often associated with specific 3D structure ⓘ often associated with specific biochemical function ⓘ |
| hasScope |
eukaryotic proteins
ⓘ
prokaryotic proteins ⓘ viral proteins ⓘ |
| isBasedOn | multiple sequence alignment ⓘ |
| isMaintainedBy |
European Bioinformatics Institute
NERFINISHED
ⓘ
Wellcome Sanger Institute NERFINISHED ⓘ |
| isModeledBy | profile hidden Markov model ⓘ |
| isPartOf |
Pfam-A collection
NERFINISHED
ⓘ
Pfam-B collection NERFINISHED ⓘ XFAM resource ⓘ |
| isUsedFor |
comparative genomics
ⓘ
domain architecture analysis ⓘ evolutionary studies of proteins ⓘ protein domain annotation ⓘ protein family classification ⓘ protein function prediction ⓘ protein sequence analysis ⓘ |
| represents |
functional unit of protein
ⓘ
structural unit of protein ⓘ |
| usedBy |
Ensembl
NERFINISHED
ⓘ
InterPro NERFINISHED ⓘ NCBI protein annotation pipelines NERFINISHED ⓘ UniProt NERFINISHED ⓘ |
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.