PDBx/mmCIF dictionary
E736791
The PDBx/mmCIF dictionary is the standardized data schema used by the Protein Data Bank to define and organize macromolecular structure information in a machine-readable format.
Statements (49)
| Predicate | Object |
|---|---|
| instanceOf |
data dictionary
ⓘ
data schema ⓘ ontology for macromolecular structure data ⓘ |
| appliesTo |
atomic coordinate data
ⓘ
biological assembly descriptions ⓘ chemical component descriptions ⓘ experimental conditions ⓘ refinement statistics ⓘ sequence information ⓘ validation metrics ⓘ |
| basedOn | mmCIF format ⓘ |
| compatibleWith | mmCIF data files ⓘ |
| contains |
categories
ⓘ
constraints on data values ⓘ data items ⓘ definitions of data types ⓘ enumeration ranges ⓘ relationships between categories ⓘ |
| defines |
categories of structural biology information
ⓘ
data items for 3DEM structure data ⓘ data items for NMR structure data ⓘ data items for macromolecular crystallography ⓘ relationships between structural data items ⓘ |
| designedFor |
extensibility of structural data representation
ⓘ
long-term archival of structural data ⓘ |
| enables |
automated parsing of PDB data
ⓘ
schema-driven data validation ⓘ software interoperability in structural biology ⓘ uniform representation of metadata ⓘ |
| extends | Crystallographic Information Framework NERFINISHED ⓘ |
| formatFor | PDBx/mmCIF files ⓘ |
| goal |
to provide a comprehensive schema for macromolecular structure data
ⓘ
to replace legacy PDB format limitations ⓘ |
| implementedIn | STAR syntax ⓘ |
| maintainedBy | wwPDB partners NERFINISHED ⓘ |
| standardFor |
PDB archival data
ⓘ
PDB data deposition ⓘ PDB data exchange ⓘ |
| standardizedBy | wwPDB NERFINISHED ⓘ |
| supports |
complex biological assemblies
ⓘ
integrated experimental data descriptions ⓘ large macromolecular structures ⓘ rich annotation of structural data ⓘ validation of structural models ⓘ |
| usedBy |
Protein Data Bank
NERFINISHED
ⓘ
Worldwide Protein Data Bank NERFINISHED ⓘ |
| usedFor |
machine-readable description of structural biology data
ⓘ
organization of Protein Data Bank data ⓘ representation of macromolecular structure data ⓘ |
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.